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arXiv:2602.13161v2 Announce Type: replace-cross Abstract: Optical thermodynamics has recently emerged as a theoretical framework describing a Rayleigh-Jeans (RJ) modal power distribution of multimoded nonlinear photonic...
arXiv:2602.15152v2 Announce Type: replace-cross Abstract: We construct examples and provide a classification of self-similar solutions to the two-dimensional incompressible Euler equations whose pseudo-velocity fields possess...
arXiv:2602.16679v2 Announce Type: replace-cross Abstract: Ab initio auxiliary-field quantum Monte Carlo (AFQMC) is a systematically improvable many-body method, but its application to extended solids has...
arXiv:2602.20176v1 Announce Type: new Abstract: D-peptide binders targeting L-proteins have promising therapeutic potential. Despite rapid advances in machine learning-based target-conditioned peptide design, generating D-peptide binders...
arXiv:2602.20198v1 Announce Type: new Abstract: Pro-inflammatory peptides (PIPs) play critical roles in immune signaling and inflammation but are difficult to identify experimentally due to costly...
arXiv:2602.20209v1 Announce Type: new Abstract: The discovery of novel proteins relies on sensitive protein identification, for which de novo peptide sequencing (DNPS) from mass spectra...
arXiv:2602.20495v1 Announce Type: new Abstract: Integrating high-dimensional biological data into data-driven mechanistic modeling requires rigorous practical identifiability to ensure interpretability and generalizability. However, coordinate identifiability...
arXiv:2602.20702v1 Announce Type: new Abstract: Tipping points are one of the hot topics in modern physics of complex systems. But what is a tipping point?...
arXiv:2602.20883v1 Announce Type: new Abstract: Biological systems like long-lived clonal organisms, holobionts and clades challenge traditional evolutionary thinking since they adapt without populations or reproduction....
arXiv:2602.21150v1 Announce Type: new Abstract: Dengue remains a major global public health concern due to its high mortality and economic burden. Mathematical modeling is essential...
arXiv:2602.18889v1 Announce Type: cross Abstract: The Euler characteristic transform (ECT) is an emerging and powerful framework within topological data analysis for quantifying the geometry of...
arXiv:2602.20218v1 Announce Type: cross Abstract: Purpose: To determine whether targeted T2 fluid-attenuated inversion recovery (T2-FLAIR) dropout training improves glioblastoma MRI tumor segmentation robustness to missing...
arXiv:2602.20266v1 Announce Type: cross Abstract: We construct a new class of infinite-dimensional diffusions taking values in a generalized Kingman simplex. Our model describes the temporal...
arXiv:2602.20289v1 Announce Type: cross Abstract: Magnetic resonance spectroscopy (MRS) is used to quantify metabolites in vivo and estimate biomarkers for conditions ranging from neurological disorders...
arXiv:2602.20344v1 Announce Type: cross Abstract: Graph self-supervised learning (GSSL) has demonstrated strong potential for generating expressive graph embeddings without the need for human annotations, making...
arXiv:2602.20449v1 Announce Type: cross Abstract: Modern Protein Language Models (PLMs) apply transformer-based model architectures from natural language processing to biological sequences, predicting a variety of...
arXiv:2503.01834v3 Announce Type: replace Abstract: Fibroblast cells play a key role in maintaining the extracellular matrix. During wound healing, fibroblasts differentiate into highly contractile myofibroblasts,...
arXiv:2504.15166v4 Announce Type: replace Abstract: Population dynamics in fields such as molecular biology, epidemiology, and ecology exhibit highly stochastic and non-linear behavior. In gene regulatory...
arXiv:2508.15077v2 Announce Type: replace Abstract: Previous pandemics, including influenza pandemics and Covid-19, have disproportionately impacted M\=aori and Pacific populations in Aotearoa New Zealand. The reasons...
arXiv:2509.02060v3 Announce Type: replace Abstract: Peptide self-assembly prediction offers a powerful bottom-up strategy for designing biocompatible, low-toxicity materials for large-scale synthesis in a broad range...
arXiv:2510.05193v2 Announce Type: replace Abstract: Multicellular tissues, such as the epithelium coating a developing embryo, often combine complex tissue shapes with heterogeneity in the spatial...
arXiv:2510.06578v2 Announce Type: replace Abstract: Valvular heart disease is prevalent and a major contributor to heart failure. Valve leaflet strain is a promising metric for...
arXiv:2512.24192v2 Announce Type: replace Abstract: We present SeedProteo, a diffusion-based model for de novo all-atom protein design. We demonstrate how to repurpose a cutting-edge folding...
arXiv:2602.02620v2 Announce Type: replace Abstract: Cryo-electron microscopy (cryo-EM) has revolutionized structural biology by enabling near-atomic-level visualization of biomolecular assemblies. However, the exponential growth in cryo-EM...