CUEBES

Evaluation of machine-learning models to measure individualized treatment effects from randomized clinical trial data with time-to-event outcomes

arXiv:2506.12277v2 Announce Type: replace Abstract: Objective: In randomized clinical trials, prediction models can be used to explore the relationships between patients' variables (e.g., clinical, pathological,...

Medicine & Health Artificial Intelligence

arXiv Biology Feb 3

PaceLLM: Brain-Inspired Large Language Models for Long-Context Understanding

arXiv:2506.17310v2 Announce Type: replace Abstract: While Large Language Models (LLMs) demonstrate strong performance across domains, their long-context capabilities are limited by transient neural activations causing...

Neuroscience Biology

arXiv Biology Feb 3

Comparing Bayesian and Frequentist Inference in Biological Models: A Comparative Analysis of Accuracy, Uncertainty, and Identifiability

arXiv:2511.15839v2 Announce Type: replace Abstract: Mathematical models support inference and forecasting in ecology and epidemiology, but results depend on the estimation framework. We compare Bayesian...

Engineering Software

arXiv Biology Feb 3

MERGE-RNA: a physics-based model to predict RNA secondary structure ensembles with chemical probing

arXiv:2512.20581v2 Announce Type: replace Abstract: RNA function is deeply tied to secondary structure, with most molecules operating through dynamic and heterogeneous structural ensembles. While current...

Chemistry Biology

arXiv Biology Feb 3

Y-Trim: Evidence-gated per-read trimming for stochastic end artifacts in ssWGBS

arXiv:2601.19002v2 Announce Type: replace Abstract: Single-stranded whole-genome bisulfite sequencing (ssWGBS) profiles DNA methylation in low-input and fragmented samples, yet Adaptase-mediated tailing creates stochastic artifacts that...

Genetics Biology

arXiv Biology Feb 3

Thermodynamic Space of Chemical Reaction Networks

arXiv:2407.11498v3 Announce Type: replace-cross Abstract: Living systems operate out of equilibrium, continuously consuming energy to sustain organised, functional states. Their emergent behaviour usually relies on...

Biology Psychology

arXiv Biology Feb 3

GENERator: A Long-Context Generative Genomic Foundation Model

arXiv:2502.07272v5 Announce Type: replace-cross Abstract: The rapid advancement of DNA sequencing has produced vast genomic datasets, yet interpreting and engineering genomic function remain fundamental challenges....

Engineering Biology

arXiv Biology Feb 3

A mean-field theory for heterogeneous random growth with redistribution

arXiv:2503.23189v3 Announce Type: replace-cross Abstract: We study the competition between random multiplicative growth and redistribution/migration in the mean-field limit, when the number of sites is...

Software Energy

arXiv Biology Feb 3

Trade-offs between structural richness and communication efficiency in music network representations

arXiv:2509.14053v2 Announce Type: replace-cross Abstract: Music is a structured and perceptually rich sequence of sounds in time with well-defined symbolic features, whose perception is shaped...

Energy Engineering

arXiv Biology Feb 3

Hybrid Lie semi-group and cascade structures for the generalized Gaussian derivative model for visual receptive fields

arXiv:2509.15748v2 Announce Type: replace-cross Abstract: Because of the variabilities of real-world image structures under the natural image transformations that arise when observing similar objects or...

Biology Engineering

arXiv Biology Feb 3

Reaction Prediction via Interaction Modeling of Symmetric Difference Shingle Sets

arXiv:2511.06356v3 Announce Type: replace-cross Abstract: Chemical reaction prediction remains a fundamental challenge in organic chemistry, where existing machine learning models face two critical limitations: sensitivity...

Chemistry Genetics

arXiv Biology Feb 3

GPCR-Filter: a deep learning framework for efficient and precise GPCR modulator discovery

arXiv:2601.19149v2 Announce Type: replace-cross Abstract: G protein-coupled receptors (GPCRs) govern diverse physiological processes and are central to modern pharmacology. Yet discovering GPCR modulators remains challenging...

Chemistry Software

arXiv Math Feb 3

On finite-dimensional encoding/decoding theorems for neural operators

arXiv:2602.00068v1 Announce Type: new Abstract: Recently, versions of neural networks with infinite-dimensional affine operators inside the computational units (``neural operator'' networks) have been applied to...

Software Mathematics

arXiv Math Feb 3

Torse-forming vector field with certain deformations

arXiv:2602.00112v1 Announce Type: new Abstract: Torse-forming vector fields are generalizations of some important vector fields. In this paper, we present some techniques to transform a...

Technology Policy

arXiv Math Feb 3

A Structural Characterization of the Hit Image in the Motivic Steenrod Algebra

arXiv:2602.00118v1 Announce Type: new Abstract: The motivic hit problem seeks a minimal generating set for the motivic cohomology of classifying spaces as a module over...

Engineering Mathematics

arXiv Math Feb 3

Zeros of Random Sections on Line Bundles

arXiv:2602.00119v1 Announce Type: new Abstract: Sections of line bundles on 2 dimensional surfaces in 3 dimensional space can have many distinct shapes. For practical purposes...

Software World News

arXiv Math Feb 3

Information Propagation and Encoding in Solids: A Quantitative Approach Towards Mechanical Intelligence

arXiv:2602.00140v1 Announce Type: new Abstract: Engineered systems typically separate mechanical function from information processing, whereas biological systems can exploit physical structure as a medium for...

Engineering Software

arXiv Math Feb 3

Semantic-Aware Command and Control Transmission for Multi-UAVs

arXiv:2602.00142v1 Announce Type: new Abstract: Uncrewed aerial vehicles (UAVs) have played an important role in the low-altitude economy and have been used in various applications....

Software Policy

arXiv Math Feb 3

On Stable Univalence and Coefficient Estimates for a Class of Pluriharmonic Mappings in Convex Reinhardt Domains

arXiv:2602.00177v1 Announce Type: new Abstract: In this paper, we investigate the geometric properties of complex-valued pluriharmonic mappings defined over convex Reinhardt domains in $\mathbb{C}^n$. We...

Software Mathematics

arXiv Math Feb 3

Interleaved Friezes: Celtic Knotwork and Hitomezashi

arXiv:2602.00178v1 Announce Type: new Abstract: Both Celtic knotwork and strips of hitomezashi stitching can be interpreted as being two-sided friezes wherein the patterns on the...

Policy

arXiv Math Feb 3

Harmonic projection and hypercentral extensions

arXiv:2602.00187v1 Announce Type: new Abstract: The Liouville property is a strong form of amenability, but contrary to amenability, it is not well-behaved under extensions. In...

Policy Space & Astronomy

arXiv Math Feb 3

A $p$-adic ($p\equiv 3\!\!\pmod 4$) depth-$5$ supercongruence for Gaussian $p$-th power sums over a square

arXiv:2602.00206v1 Announce Type: new Abstract: Let $p$ be an odd prime. Define the Gaussian power sum \[ \G_n(p)=\sum_{a=1}^{p-1}\sum_{b=1}^{p-1}(a+b\ii)^n\in\ZZ[\ii]. \] We determine $\G_p(p)$ modulo high powers...

Energy Policy

arXiv Math Feb 3

A Cayley theorem for posets

arXiv:2602.00210v1 Announce Type: new Abstract: We show that every poset P=(P,\le) satisfying the Ascending Chain Condition can be isomorphically embedded into the poset of all...

Embedded Systems Software

arXiv Math Feb 3

Exact cospectrality probabilities for uniform random matrices

arXiv:2602.00233v1 Announce Type: new Abstract: We study the conjugation action of orthogonal matrices on symmetric random matrices. Given a fixed orthogonal matrix over an algebraic...

Software Mathematics